Complex Carbohydrate Magnetic Resonance Database (CCMRD)
Carbohydrates are crucial for various life activities in living organisms. The Complex Carbohydrates Magnetic Resonance Database (CCMRD), a solid-state NMR database for complex carbohydrates developed at Michigan State University. The Solid-state NMR spectroscopy reveals the molecular structure and dynamics of insoluble complex carbohydrates.
| Database ID | Trival Name | Linear Code | Compound Class | Taxonomy Domain | Species | Residue | SNFG | Chemical Structure | Chemical Shifts (ppm) | Spectrometer (MHz) | Temperature (K) | pH | NMR Reference Compound | Sample Treatment | Reference |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ccmrd_598 | Glucuronic acid | GlcpAc | Polysaccharide | plant | Sorghum | ?-?-GlcpAc |
|
|
C1: 98.6, C2: 72.4 | 850 | 298.0 | None | TMS | whole cell | Yu Gao et al., A grass-specific cellulose–xylan interaction dominates in sorghum secondary cell walls, NATURE COMMUNICATIONS, 2020 |
| ccmrd_599 | Acetyl-methyl groups | Ac | AcMe Groups | plant | Sorghum | ?-?-Ac |
|
|
C1: 174.0, C2: 21.4 | 850 | 298.0 | None | TMS | whole cell | Yu Gao et al., A grass-specific cellulose–xylan interaction dominates in sorghum secondary cell walls, NATURE COMMUNICATIONS, 2020 |
| ccmrd_600 | cellulose | Glcp | Polysaccharide | plant | Arabidopsis thaliana | b-D-Glcp |
|
|
C1: 105.7, C2: 73.2, C3: 77.9, C4: 89.8, C5: 73.3, C6: 65.1 | 400 | 298.0 | None | TMS | whole cell | Alex Kirui et al., A pectin methyltransferase modulates polysaccharide dynamics and interactions in Arabidopsis primary cell walls: Evidence from solid-state NMR, Carbohydrate Polymers, 2021 |
| ccmrd_601 | cellulose | Glcp | Polysaccharide | plant | Arabidopsis thaliana | b-D-Glcp |
|
|
C1: 105.7, C2: 73.2, C3: 77.9, C4: 85.1, C5: 76.5, C6: 62.0 | 400 | 298.0 | None | TMS | whole cell | Alex Kirui et al., A pectin methyltransferase modulates polysaccharide dynamics and interactions in Arabidopsis primary cell walls: Evidence from solid-state NMR, Carbohydrate Polymers, 2021 |
| ccmrd_602 | Xyloglucan | Xylp | Polysaccharide | plant | Arabidopsis thaliana | ?-?-Xylp |
|
|
C1: 100.1, C2: 73.1, C4: 70.8, C5: 62.8 | 400 | 298.0 | None | TMS | whole cell | Alex Kirui et al., A pectin methyltransferase modulates polysaccharide dynamics and interactions in Arabidopsis primary cell walls: Evidence from solid-state NMR, Carbohydrate Polymers, 2021 |
| ccmrd_603 | Galacturonic acid | GalpAc | Polysaccharide | plant | Arabidopsis thaliana | ?-?-GalpAC |
|
|
C1: 100.1, C2: 69.8 | 400 | 298.0 | None | TMS | whole cell | Alex Kirui et al., A pectin methyltransferase modulates polysaccharide dynamics and interactions in Arabidopsis primary cell walls: Evidence from solid-state NMR, Carbohydrate Polymers, 2021 |
| ccmrd_604 | Rhamnose units | Rhap | Polysaccharide | plant | Arabidopsis thaliana | ?-?-Rhap |
|
|
C1: 100.1, C2: 79.3, C5: 69.8, C6: 17.6 | 400 | 298.0 | None | TMS | whole cell | Alex Kirui et al., A pectin methyltransferase modulates polysaccharide dynamics and interactions in Arabidopsis primary cell walls: Evidence from solid-state NMR, Carbohydrate Polymers, 2021 |
| ccmrd_605 | Galactose units | Galp | Polysaccharide | plant | Arabidopsis thaliana | ?-?-Galp |
|
|
C1: 105.7, C2: 73.2, C3: 70.1, C5: 74.8, C6: 62.6 | 400 | 298.0 | None | TMS | whole cell | Alex Kirui et al., A pectin methyltransferase modulates polysaccharide dynamics and interactions in Arabidopsis primary cell walls: Evidence from solid-state NMR, Carbohydrate Polymers, 2021 |
| ccmrd_606 | Arabinan | Araf | Polysaccharide | plant | Arabidopsis thaliana | ?-?-Araf |
|
|
C1: 108.8, C2: 82.3, C4: 83.4, C5: 68.0 | 400 | 298.0 | None | TMS | whole cell | Alex Kirui et al., A pectin methyltransferase modulates polysaccharide dynamics and interactions in Arabidopsis primary cell walls: Evidence from solid-state NMR, Carbohydrate Polymers, 2021 |
| ccmrd_607 | Arabinan | Araf | Polysaccharide | plant | Arabidopsis thaliana | ?-?-Araf |
|
|
C1: 108.8, C2: 82.3, C4: 85.1, C5: 62.5 | 400 | 298.0 | None | TMS | whole cell | Alex Kirui et al., A pectin methyltransferase modulates polysaccharide dynamics and interactions in Arabidopsis primary cell walls: Evidence from solid-state NMR, Carbohydrate Polymers, 2021 |