Glyco Property List
Pooled literature properties (glycanDB). Optional filters: ?dataset=uv_vis&property_key=...
GET /api/gdd/glyco-properties/?format=api&page=3
{ "count": 839, "next": "http://glycodata.org/api/gdd/glyco-properties/?format=api&page=4", "previous": "http://glycodata.org/api/gdd/glyco-properties/?format=api&page=2", "results": [ { "id": 41, "dataset": "carbohydrate", "entity": "Man9", "entity_group": "", "entity_class": "glycan", "property": "collision cross section", "property_key": "ccs", "value": "437", "unit": "Å^2", "value_reported": "437", "unit_reported": "Å^2", "method": "Experiment", "method_detail": "DTIMS, N2 drift gas, [M+K]+, high-mannose N-glycan", "conditions": "DTIMS, N2 drift gas, [M+K]+, high-mannose N-glycan", "conditions_detail": "DTIMS, N2 drift gas, [M+K]+, high-mannose N-glycan | adduct: [M+K]+ | drift gas: N2 | ims method: DTIMS", "doi": "10.1039/C5AN01092F", "source_url": "https://pubs.rsc.org/en/content/articlehtml/2015/an/c5an01092f", "year": "2015", "confidence": "high", "comments": "\"DTCCSN2 (K) 437 Å2\" — High-mannose N-glycan; N-linked [Struwe, W.B.; Benesch, J.L.; Harvey, D.J.; Pagel, K., 2015, confidence: high]" }, { "id": 42, "dataset": "carbohydrate", "entity": "Man9Glc", "entity_group": "", "entity_class": "glycan", "property": "collision cross section", "property_key": "ccs", "value": "453", "unit": "Å^2", "value_reported": "453", "unit_reported": "Å^2", "method": "Experiment", "method_detail": "DTIMS, N2 drift gas, [M+H]+, high-mannose N-glycan", "conditions": "DTIMS, N2 drift gas, [M+H]+, high-mannose N-glycan", "conditions_detail": "DTIMS, N2 drift gas, [M+H]+, high-mannose N-glycan | adduct: [M+H]+ | drift gas: N2 | ims method: DTIMS", "doi": "10.1039/C5AN01092F", "source_url": "https://pubs.rsc.org/en/content/articlehtml/2015/an/c5an01092f", "year": "2015", "confidence": "high", "comments": "\"DTCCSN2 (H) 453 Å2\" — Glc1Man9GlcNAc2 high-mannose N-glycan; N-linked [Struwe, W.B.; Benesch, J.L.; Harvey, D.J.; Pagel, K., 2015, confidence: high]" }, { "id": 43, "dataset": "carbohydrate", "entity": "Man9Glc", "entity_group": "", "entity_class": "glycan", "property": "collision cross section", "property_key": "ccs", "value": "454", "unit": "Å^2", "value_reported": "454", "unit_reported": "Å^2", "method": "Experiment", "method_detail": "DTIMS, N2 drift gas, [M+K]+, high-mannose N-glycan", "conditions": "DTIMS, N2 drift gas, [M+K]+, high-mannose N-glycan", "conditions_detail": "DTIMS, N2 drift gas, [M+K]+, high-mannose N-glycan | adduct: [M+K]+ | drift gas: N2 | ims method: DTIMS", "doi": "10.1039/C5AN01092F", "source_url": "https://pubs.rsc.org/en/content/articlehtml/2015/an/c5an01092f", "year": "2015", "confidence": "high", "comments": "\"DTCCSN2 (K) 454 Å2\" — Glc1Man9GlcNAc2 high-mannose N-glycan; N-linked [Struwe, W.B.; Benesch, J.L.; Harvey, D.J.; Pagel, K., 2015, confidence: high]" }, { "id": 44, "dataset": "carbohydrate", "entity": "Man3", "entity_group": "", "entity_class": "glycan", "property": "collision cross section", "property_key": "ccs", "value": "269", "unit": "Å^2", "value_reported": "269", "unit_reported": "Å^2", "method": "Experiment", "method_detail": "DTIMS, N2 drift gas, [M-H]-, high-mannose N-glycan", "conditions": "DTIMS, N2 drift gas, [M-H]-, high-mannose N-glycan", "conditions_detail": "DTIMS, N2 drift gas, [M-H]-, high-mannose N-glycan | adduct: [M-H]- | drift gas: N2 | ims method: DTIMS", "doi": "10.1039/C5AN01092F", "source_url": "https://pubs.rsc.org/en/content/articlehtml/2015/an/c5an01092f", "year": "2015", "confidence": "high", "comments": "\"deprotonated Man3 DTCCSN2 is 269 Å2\" — High-mannose N-glycan; N-linked [Struwe, W.B.; Benesch, J.L.; Harvey, D.J.; Pagel, K., 2015, confidence: high]" }, { "id": 45, "dataset": "carbohydrate", "entity": "Man3", "entity_group": "", "entity_class": "glycan", "property": "collision cross section", "property_key": "ccs", "value": "279", "unit": "Å^2", "value_reported": "279", "unit_reported": "Å^2", "method": "Experiment", "method_detail": "DTIMS, N2 drift gas, [M+Cl]-, high-mannose N-glycan", "conditions": "DTIMS, N2 drift gas, [M+Cl]-, high-mannose N-glycan", "conditions_detail": "DTIMS, N2 drift gas, [M+Cl]-, high-mannose N-glycan | adduct: [M+Cl]- | drift gas: N2 | ims method: DTIMS", "doi": "10.1039/C5AN01092F", "source_url": "https://pubs.rsc.org/en/content/articlehtml/2015/an/c5an01092f", "year": "2015", "confidence": "medium", "comments": "\"chloride adduct 279 Å2\" — High-mannose N-glycan; N-linked. Chloride adduct of Man3 [Struwe, W.B.; Benesch, J.L.; Harvey, D.J.; Pagel, K., 2015, confidence: medium]" }, { "id": 46, "dataset": "carbohydrate", "entity": "Man3", "entity_group": "", "entity_class": "glycan", "property": "collision cross section", "property_key": "ccs", "value": "290", "unit": "Å^2", "value_reported": "290", "unit_reported": "Å^2", "method": "Experiment", "method_detail": "DTIMS, N2 drift gas, [M+H2PO4]-, high-mannose N-glycan", "conditions": "DTIMS, N2 drift gas, [M+H2PO4]-, high-mannose N-glycan", "conditions_detail": "DTIMS, N2 drift gas, [M+H2PO4]-, high-mannose N-glycan | adduct: [M+H2PO4]- | drift gas: N2 | ims method: DTIMS", "doi": "10.1039/C5AN01092F", "source_url": "https://pubs.rsc.org/en/content/articlehtml/2015/an/c5an01092f", "year": "2015", "confidence": "medium", "comments": "\"phosphate adduct 290 Å2\" — High-mannose N-glycan; N-linked. Dihydrogen phosphate adduct of Man3 [Struwe, W.B.; Benesch, J.L.; Harvey, D.J.; Pagel, K., 2015, confidence: medium]" }, { "id": 47, "dataset": "carbohydrate", "entity": "Man9Glc", "entity_group": "", "entity_class": "glycan", "property": "collision cross section", "property_key": "ccs", "value": "439", "unit": "Å^2", "value_reported": "439", "unit_reported": "Å^2", "method": "Experiment", "method_detail": "DTIMS, N2 drift gas, [M-H]-, high-mannose N-glycan", "conditions": "DTIMS, N2 drift gas, [M-H]-, high-mannose N-glycan", "conditions_detail": "DTIMS, N2 drift gas, [M-H]-, high-mannose N-glycan | adduct: [M-H]- | drift gas: N2 | ims method: DTIMS", "doi": "10.1039/C5AN01092F", "source_url": "https://pubs.rsc.org/en/content/articlehtml/2015/an/c5an01092f", "year": "2015", "confidence": "high", "comments": "\"Man9Glc DTCCSN2 values for [M - H]- (439 Å2)\" — Glc1Man9GlcNAc2 high-mannose N-glycan; N-linked [Struwe, W.B.; Benesch, J.L.; Harvey, D.J.; Pagel, K., 2015, confidence: high]" }, { "id": 48, "dataset": "carbohydrate", "entity": "Man9Glc", "entity_group": "", "entity_class": "glycan", "property": "collision cross section", "property_key": "ccs", "value": "455", "unit": "Å^2", "value_reported": "455", "unit_reported": "Å^2", "method": "Experiment", "method_detail": "DTIMS, N2 drift gas, [M+H2PO4]-, high-mannose N-glycan", "conditions": "DTIMS, N2 drift gas, [M+H2PO4]-, high-mannose N-glycan", "conditions_detail": "DTIMS, N2 drift gas, [M+H2PO4]-, high-mannose N-glycan | adduct: [M+H2PO4]- | drift gas: N2 | ims method: DTIMS", "doi": "10.1039/C5AN01092F", "source_url": "https://pubs.rsc.org/en/content/articlehtml/2015/an/c5an01092f", "year": "2015", "confidence": "high", "comments": "\"compared to [M + H2PO4]- (455 Å2)\" — Glc1Man9GlcNAc2 high-mannose N-glycan; N-linked. Dihydrogen phosphate adduct [Struwe, W.B.; Benesch, J.L.; Harvey, D.J.; Pagel, K., 2015, confidence: high]" }, { "id": 49, "dataset": "carbohydrate", "entity": "cellobiose", "entity_group": "", "entity_class": "disaccharide", "property": "collision cross section", "property_key": "ccs", "value": "167.86", "unit": "Å^2", "value_reported": "167.86", "unit_reported": "Å^2", "method": "Experiment", "method_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, stepped field method", "conditions": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, stepped field method", "conditions_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, stepped field method | adduct: [M-H]- | drift gas: N2 | ims method: DTIMS", "doi": "10.1021/jasms.4c00370", "source_url": "https://pmc.ncbi.nlm.nih.gov/articles/PMC11887428/", "year": "2025", "confidence": "high", "comments": "\"Cellobiose [M - H]- 167.86\" — Experimental reference DTCCSN2 (stepped field) compiled in this study [Keng, M.; Merz, K.M. Jr., 2025, confidence: high]" }, { "id": 50, "dataset": "carbohydrate", "entity": "cellobiose", "entity_group": "", "entity_class": "disaccharide", "property": "collision cross section", "property_key": "ccs", "value": "179.7", "unit": "Å^2", "value_reported": "179.7", "unit_reported": "Å^2", "method": "Experiment", "method_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method", "conditions": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method", "conditions_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method | adduct: [M-H]- | drift gas: N2 | ims method: DTIMS", "doi": "10.1021/jasms.4c00370", "source_url": "https://pmc.ncbi.nlm.nih.gov/articles/PMC11887428/", "year": "2025", "confidence": "high", "comments": "\"Cellobiose [M - H]- 179.70\" — Experimental reference DTCCSN2 (single field) compiled in this study [Keng, M.; Merz, K.M. Jr., 2025, confidence: high]" }, { "id": 51, "dataset": "carbohydrate", "entity": "glucosamine", "entity_group": "", "entity_class": "monosaccharide", "property": "collision cross section", "property_key": "ccs", "value": "139.75", "unit": "Å^2", "value_reported": "139.75", "unit_reported": "Å^2", "method": "Experiment", "method_detail": "DTIMS (Agilent 6560), N2 drift gas, [M+H]+, single field method", "conditions": "DTIMS (Agilent 6560), N2 drift gas, [M+H]+, single field method", "conditions_detail": "DTIMS (Agilent 6560), N2 drift gas, [M+H]+, single field method | adduct: [M+H]+ | drift gas: N2 | ims method: DTIMS", "doi": "10.1021/jasms.4c00370", "source_url": "https://pmc.ncbi.nlm.nih.gov/articles/PMC11887428/", "year": "2025", "confidence": "high", "comments": "\"Glucosamine [M + H]+ 139.75 +/- 2.3\" — Amino sugar; reported value 139.75 +/- 2.3 [Keng, M.; Merz, K.M. Jr., 2025, confidence: high]" }, { "id": 52, "dataset": "carbohydrate", "entity": "glucuronate", "entity_group": "", "entity_class": "carbohydrate (other)", "property": "collision cross section", "property_key": "ccs", "value": "131.7", "unit": "Å^2", "value_reported": "131.7", "unit_reported": "Å^2", "method": "Experiment", "method_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method", "conditions": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method", "conditions_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method | adduct: [M-H]- | drift gas: N2 | ims method: DTIMS", "doi": "10.1021/jasms.4c00370", "source_url": "https://pmc.ncbi.nlm.nih.gov/articles/PMC11887428/", "year": "2025", "confidence": "high", "comments": "\"Glucuronate [M - H]- 131.70\" — Uronic acid (sugar acid) [Keng, M.; Merz, K.M. Jr., 2025, confidence: high]" }, { "id": 53, "dataset": "carbohydrate", "entity": "inositol", "entity_group": "", "entity_class": "carbohydrate (other)", "property": "collision cross section", "property_key": "ccs", "value": "129.96", "unit": "Å^2", "value_reported": "129.96", "unit_reported": "Å^2", "method": "Experiment", "method_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method", "conditions": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method", "conditions_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method | adduct: [M-H]- | drift gas: N2 | ims method: DTIMS", "doi": "10.1021/jasms.4c00370", "source_url": "https://pmc.ncbi.nlm.nih.gov/articles/PMC11887428/", "year": "2025", "confidence": "high", "comments": "\"Inositol [M - H]- 129.96 +/- 1.9\" — Cyclitol (sugar alcohol); reported value 129.96 +/- 1.9 [Keng, M.; Merz, K.M. Jr., 2025, confidence: high]" }, { "id": 54, "dataset": "carbohydrate", "entity": "isomaltose", "entity_group": "", "entity_class": "disaccharide", "property": "collision cross section", "property_key": "ccs", "value": "180.77", "unit": "Å^2", "value_reported": "180.77", "unit_reported": "Å^2", "method": "Experiment", "method_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, stepped field method", "conditions": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, stepped field method", "conditions_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, stepped field method | adduct: [M-H]- | drift gas: N2 | ims method: DTIMS", "doi": "10.1021/jasms.4c00370", "source_url": "https://pmc.ncbi.nlm.nih.gov/articles/PMC11887428/", "year": "2025", "confidence": "high", "comments": "\"Isomaltose [M - H]- 180.77\" — Experimental reference DTCCSN2 (stepped field) [Keng, M.; Merz, K.M. Jr., 2025, confidence: high]" }, { "id": 55, "dataset": "carbohydrate", "entity": "isomaltose", "entity_group": "", "entity_class": "disaccharide", "property": "collision cross section", "property_key": "ccs", "value": "171.96", "unit": "Å^2", "value_reported": "171.96", "unit_reported": "Å^2", "method": "Experiment", "method_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method", "conditions": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method", "conditions_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method | adduct: [M-H]- | drift gas: N2 | ims method: DTIMS", "doi": "10.1021/jasms.4c00370", "source_url": "https://pmc.ncbi.nlm.nih.gov/articles/PMC11887428/", "year": "2025", "confidence": "high", "comments": "\"Isomaltose [M - H]- 171.96\" — Experimental reference DTCCSN2 (single field) [Keng, M.; Merz, K.M. Jr., 2025, confidence: high]" }, { "id": 56, "dataset": "carbohydrate", "entity": "lactose", "entity_group": "", "entity_class": "disaccharide", "property": "collision cross section", "property_key": "ccs", "value": "176.9", "unit": "Å^2", "value_reported": "176.9", "unit_reported": "Å^2", "method": "Experiment", "method_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method", "conditions": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method", "conditions_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method | adduct: [M-H]- | drift gas: N2 | ims method: DTIMS", "doi": "10.1021/jasms.4c00370", "source_url": "https://pmc.ncbi.nlm.nih.gov/articles/PMC11887428/", "year": "2025", "confidence": "high", "comments": "\"Lactose [M - H]- 176.90\" — Experimental reference DTCCSN2 (single field) [Keng, M.; Merz, K.M. Jr., 2025, confidence: high]" }, { "id": 57, "dataset": "carbohydrate", "entity": "lactose", "entity_group": "", "entity_class": "disaccharide", "property": "collision cross section", "property_key": "ccs", "value": "170.23", "unit": "Å^2", "value_reported": "170.23", "unit_reported": "Å^2", "method": "Experiment", "method_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, stepped field method", "conditions": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, stepped field method", "conditions_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, stepped field method | adduct: [M-H]- | drift gas: N2 | ims method: DTIMS", "doi": "10.1021/jasms.4c00370", "source_url": "https://pmc.ncbi.nlm.nih.gov/articles/PMC11887428/", "year": "2025", "confidence": "high", "comments": "\"Lactose [M - H]- 170.23\" — Experimental reference DTCCSN2 (stepped field) [Keng, M.; Merz, K.M. Jr., 2025, confidence: high]" }, { "id": 58, "dataset": "carbohydrate", "entity": "maltose", "entity_group": "", "entity_class": "disaccharide", "property": "collision cross section", "property_key": "ccs", "value": "180.1", "unit": "Å^2", "value_reported": "180.1", "unit_reported": "Å^2", "method": "Experiment", "method_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method", "conditions": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method", "conditions_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method | adduct: [M-H]- | drift gas: N2 | ims method: DTIMS", "doi": "10.1021/jasms.4c00370", "source_url": "https://pmc.ncbi.nlm.nih.gov/articles/PMC11887428/", "year": "2025", "confidence": "high", "comments": "\"Maltose [M - H]- 180.10\" — Experimental reference DTCCSN2 (single field) [Keng, M.; Merz, K.M. Jr., 2025, confidence: high]" }, { "id": 59, "dataset": "carbohydrate", "entity": "maltose", "entity_group": "", "entity_class": "disaccharide", "property": "collision cross section", "property_key": "ccs", "value": "205.9", "unit": "Å^2", "value_reported": "205.9", "unit_reported": "Å^2", "method": "Experiment", "method_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, stepped field method", "conditions": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, stepped field method", "conditions_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, stepped field method | adduct: [M-H]- | drift gas: N2 | ims method: DTIMS", "doi": "10.1021/jasms.4c00370", "source_url": "https://pmc.ncbi.nlm.nih.gov/articles/PMC11887428/", "year": "2025", "confidence": "medium", "comments": "\"Maltose [M - H]- 205.90\" — Experimental reference DTCCSN2 (stepped field); notably larger than single-field value, flagged in source [Keng, M.; Merz, K.M. Jr., 2025, confidence: medium]" }, { "id": 60, "dataset": "carbohydrate", "entity": "palatinose", "entity_group": "", "entity_class": "disaccharide", "property": "collision cross section", "property_key": "ccs", "value": "177.9", "unit": "Å^2", "value_reported": "177.9", "unit_reported": "Å^2", "method": "Experiment", "method_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method", "conditions": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method", "conditions_detail": "DTIMS (Agilent 6560), N2 drift gas, [M-H]-, single field method | adduct: [M-H]- | drift gas: N2 | ims method: DTIMS", "doi": "10.1021/jasms.4c00370", "source_url": "https://pmc.ncbi.nlm.nih.gov/articles/PMC11887428/", "year": "2025", "confidence": "high", "comments": "\"Palatinose [M - H]- 177.90\" — Experimental reference DTCCSN2 (single field) [Keng, M.; Merz, K.M. Jr., 2025, confidence: high]" } ] }